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WorkflowHub SOPs Workshop
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Join us on Friday Feb 9th 2024 at 14:00:00 (Central European Time) for an online workshop, where you can contribute to our discussions on hosting Standard Operating Procedures (SOPs) on WorkflowHub. Register here.
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WorkflowHub "Ask me Anything"
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Join us on Friday 30th June 2023 at 12:00:00 GMT+0100 (British Summer Time) for an online event where you can ask any questions about WorkflowHub and workflows. Register here.
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EOSC Symposium 2022
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Justin Clark-Casey presented WorkflowHub at the EOSC Symposium 2022 on 16th November 2022: Justin Clark-Casey; Carole Goble; Finn Bacall; Frederik Coppens; WorkflowHub Club (2022): WorkflowHub: FAIR Workflow Registry. EOSC Symposium 2022, Prague, CZ, 2022-11-14 / –17 https://doi.org/10.5281/zenodo.7323471
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1st International Conference on FAIR Digital Objects
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The 1st International Conference on FAIR Digital Objects takes place between 26-28 October 2022. WorkflowHub features in several talks and posters highlighting how RO-Crate is a web-native and practical implementation of FDOs.
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FAIR Computational Workflows workshop
Online
The WorkflowHub team organized the Workshop on FAIR Computational Workflows at the 19th European Conference on Computational Biology (ECCB 2020).
Organizers: Ignacio Eguinoa, Björn Grüning, Frederik Coppens, Carole Goble, Stian Soiland-Reyes, Salvador Capella-Gutierrez Talks included:
- A review on the FAIR principles for computational workflows (Sarah Cohen-Boulakia)
- Toward defining and implementing FAIR for research software (Mateusz Kuzak)
- WorkflowHub - a registry for workflows (Carole Goble)
- Common Workflow Language and CWLProv (Michael R. Crusoe)
- Packaging workflows with RO-Crate (Stian Soiland-Reyes)
- Testing workflows: Life Monitor and OpenEBench (Simone Leo & Salvador Capella-Gutierrez)
- FAIR Computational Workflows & OpenEBench (Salvador Capella-Gutierrez)
- FAIR computational data analysis with Galaxy (Björn Grüning)
- Nextflow and nf-core (Alex Peltzer)
The workshop organizers aim to make all slides available later.
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BCC2020 CollaborationFest
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Online
WorkflowHub was one of the working clusters at the BCC2020 CollaborationFest as part of Bioinformatics Community Conference 2020.
Activities included a Bring your own Workflow session to register more workflows at https://workflowhub.eu/.
Improving support for Galaxy workflows worked closely with Galaxy developers at BCC and the topic Exporting RO-Crate/BioCompute-Object packaged workflows from Galaxy which made a first release of the RO-Crate Python library and alignments with BioCompute Object.
Metadata and BioSchemas aligned and released BioSchemas ComputationalWorkflow profile 0.5 which was also aligned with the next version of RO-Crate.
IWC for Galaxy Workflows looked at API for workflow registration and created an open source license drop-down list for workflows.
More:
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COVID-19 BioHackathon
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Online
WorkflowHub was one of the topics at the Virtual COVID-19 BioHackathon, attracting more than 30 developers. The participants also collaborated with the Workflows and FAIR Data topics.
Thanks to the collaborative effort WorkflowHub could be launched early at https://covid19.workflowhub.eu/ in a “pre-beta” stage. The COVID-19 workflows registered at the hackathon now appear as part of https://workflowhub.eu/
More:
-
WorkflowHub SOPs Workshop
-
Join us on Friday Feb 9th 2024 at 14:00:00 (Central European Time) for an online workshop, where you can contribute to our discussions on hosting Standard Operating Procedures (SOPs) on WorkflowHub. Register here.
-
WorkflowHub "Ask me Anything"
-
Join us on Friday 30th June 2023 at 12:00:00 GMT+0100 (British Summer Time) for an online event where you can ask any questions about WorkflowHub and workflows. Register here.
-
EOSC Symposium 2022
-
Justin Clark-Casey presented WorkflowHub at the EOSC Symposium 2022 on 16th November 2022: Justin Clark-Casey; Carole Goble; Finn Bacall; Frederik Coppens; WorkflowHub Club (2022): WorkflowHub: FAIR Workflow Registry. EOSC Symposium 2022, Prague, CZ, 2022-11-14 / –17 https://doi.org/10.5281/zenodo.7323471
-
1st International Conference on FAIR Digital Objects
-
The 1st International Conference on FAIR Digital Objects takes place between 26-28 October 2022. WorkflowHub features in several talks and posters highlighting how RO-Crate is a web-native and practical implementation of FDOs.
-
FAIR Computational Workflows workshop
Online
The WorkflowHub team organized the Workshop on FAIR Computational Workflows at the 19th European Conference on Computational Biology (ECCB 2020).
Organizers: Ignacio Eguinoa, Björn Grüning, Frederik Coppens, Carole Goble, Stian Soiland-Reyes, Salvador Capella-Gutierrez Talks included:
- A review on the FAIR principles for computational workflows (Sarah Cohen-Boulakia)
- Toward defining and implementing FAIR for research software (Mateusz Kuzak)
- WorkflowHub - a registry for workflows (Carole Goble)
- Common Workflow Language and CWLProv (Michael R. Crusoe)
- Packaging workflows with RO-Crate (Stian Soiland-Reyes)
- Testing workflows: Life Monitor and OpenEBench (Simone Leo & Salvador Capella-Gutierrez)
- FAIR Computational Workflows & OpenEBench (Salvador Capella-Gutierrez)
- FAIR computational data analysis with Galaxy (Björn Grüning)
- Nextflow and nf-core (Alex Peltzer)
The workshop organizers aim to make all slides available later.
-
BCC2020 CollaborationFest
-
Online
WorkflowHub was one of the working clusters at the BCC2020 CollaborationFest as part of Bioinformatics Community Conference 2020.
Activities included a Bring your own Workflow session to register more workflows at https://workflowhub.eu/.
Improving support for Galaxy workflows worked closely with Galaxy developers at BCC and the topic Exporting RO-Crate/BioCompute-Object packaged workflows from Galaxy which made a first release of the RO-Crate Python library and alignments with BioCompute Object.
Metadata and BioSchemas aligned and released BioSchemas ComputationalWorkflow profile 0.5 which was also aligned with the next version of RO-Crate.
IWC for Galaxy Workflows looked at API for workflow registration and created an open source license drop-down list for workflows.
More:
-
COVID-19 BioHackathon
-
Online
WorkflowHub was one of the topics at the Virtual COVID-19 BioHackathon, attracting more than 30 developers. The participants also collaborated with the Workflows and FAIR Data topics.
Thanks to the collaborative effort WorkflowHub could be launched early at https://covid19.workflowhub.eu/ in a “pre-beta” stage. The COVID-19 workflows registered at the hackathon now appear as part of https://workflowhub.eu/
More: