How to use Galaxy
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Information on how to use Galaxy can be found on the Galaxy Training Network.
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Extract a workflow from a History
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This is the most easy way to generate a Galaxy workflow and is extensively explained here.
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Editing a Galaxy workflow
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Using the Galaxy workflow editor it is recommended to add tags and/or add for example the tutorial title as Annotation/Notes. More information on how to use the editor can be found here in the "The workflow editor" section.
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Galaxy to CWL abstract
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Galaxy workflows can easily be converted to CWL abstract with galaxy2cwl. This can be seen as a standardized summary of the workflow that can be interpreted by WorkflowHub. CWL abstract can also be used to generate a diagram.
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Uploading to WorkflowHub
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Since it is not possible to reference a workflow in a Galaxy instance, you either have to download the workflow file and upload it to WorkflowHub, or make an RO-Crate following the steps below. You can still reference the workflow in the Galaxy instance using the source property in the metadata of the registration.
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